NANSEN pipeline documentation example Bojarskaite 2025

MATLAB

Version R2022b to R2024b

Github for SHAREbrain:

https://github.com/Neural-Systems-at-UIO/SHAREbrain

To download:

1. Toy dataset
   Before setting up a new project, download the example set dataset:
   hypertensionData.zip (148MB)
   
   Save it in [your data folder]
    
2. FileAdapter
   Download custom Bojarskaite File Adapters here
   +fileadapter.zip
   
   You will later copy the +fileadapter later to your project folder. (see Step 3. Find Variables of Interest)

Steps for standardising datasets with NANSEN

1. Setup new project
2. Adding data to the NANSEN project
3. Extracting metadata
4. Find variables of Interest
5. Convert data into NWB

Note: You can also read this instructions in Google Docs