BIOS9980 – Proteomics Basic Course

Schedule, syllabus and examination date

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Course content

The aim of this course is to provide an introduction to basic proteomics techniques.

Learning outcome

After successfully completing this course, you will have the following competences:

  • Practical and theoretical knowledge in proteomics.
  • Knowledge about common workflows for the large-scale analysis of proteins.
  • Fundamental knowledge about quantification of proteomes.
  • Understanding how to identify proteins from mass spectrometry data.
  • Able to evaluate MS/MS data including de novo sequencing.
  • Insight into the analysis of post-translational modifications and protein-protein interactions.
  • On-hands experience with in-gel digestions, LC-ESI and MALDI mass spectrometry and protein identification.

Admission

PhD candidates from the University of Oslo should apply for classes and register for examinations through Studentweb.

If a course has limited intake capacity, priority will be given to PhD candidates who follow an individual education plan where this particular course is included. Some national researchers’ schools may have specific rules for ranking applicants for courses with limited intake capacity.

PhD candidates who have been admitted to another higher education institution must apply for a position as a visiting student within a given deadline.

Applicants are ranked by the following criteria:

This course is a part of the EU project A4B consortium

  1. PhD candidates that are part of the EU A4B consortium who have the course as part of the approved curriculum
  2. PhD candidates at the MN faculty who have the course as part of the approved curriculum.
  3. Other PhD candidates and visiting PhD candidates.

Overlapping courses

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Teaching

  • Lectures - 2 hours every day for 5 days
  • Laboratory - 3 hours every day for 5 days

The course is given as a one-week intensive course and consists of a series of lectures followed by 3 hours training in lab. each day.

Both the lectures and the practical training in the lab are mandatory.

As the teaching involves laboratory and/or field work, you should consider taking out a separate travel and personal risk insurance. Read about your insurance cover as a student.

Examination

Oral examination.

If more than 10 students attend the course it will be offered as a three hour written exam.

Examination support material

No examination support material is allowed.

Grading scale

Grades are awarded on a pass/fail scale. Read more about the grading system.

Explanations and appeals

Resit an examination

This course offers both postponed and resit of examination. Read more:

Withdrawal from an examination

It is possible to take the exam up to 3 times. If you withdraw from the exam after the deadline or during the exam, this will be counted as an examination attempt.

It will also be counted as one of the three attempts to sit the exam for this course, if you sit the exam for one of the following courses: Error: java.lang.NullPointerException and Error: java.lang.NullPointerException

Special examination arrangements

Application form, deadline and requirements for special examination arrangements.

Evaluation

The course is subject to continuous evaluation. At regular intervals we also ask students to participate in a more comprehensive evaluation.

Facts about this course

Credits

5

Level

PhD

Teaching

Every other autumn starting 2019

The course will be offered  in week 34. Please contact Bernd Thiede for course information or Torill Rørtveit for questions regarding admission.

Examination

Every other autumn starting 2019

Teaching language

English